Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Syt7-205ENSMUST00000224135 1557 ntBASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Gm7488-201ENSMUST00000117148 684 ntBASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp7Q8R1T1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp7Q8R1T1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm2451-201ENSMUST00000199447 999 ntBASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm10290-201ENSMUST00000200451 999 ntBASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp7Q8R1T1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Mir1897-201ENSMUST00000122581 272 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm29310-201ENSMUST00000185468 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21825-201ENSMUST00000185728 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm29109-201ENSMUST00000185895 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21896-201ENSMUST00000186520 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21873-201ENSMUST00000186728 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21794-201ENSMUST00000187056 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21880-201ENSMUST00000187275 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21826-201ENSMUST00000187451 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21198-201ENSMUST00000188393 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21749-201ENSMUST00000189343 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21901-201ENSMUST00000189568 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm29424-201ENSMUST00000189716 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm28599-201ENSMUST00000189838 694 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21867-201ENSMUST00000189917 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm29269-201ENSMUST00000190087 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21722-201ENSMUST00000190153 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm28423-201ENSMUST00000190701 696 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms