Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3a1Q8K4Z5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Sf3a1Q8K4Z5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Gm15427-201ENSMUST00000117288 531 ntBASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Gm17271-201ENSMUST00000165535 355 ntBASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3a1Q8K4Z5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3a1Q8K4Z5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Gm16026-204ENSMUST00000162652 683 ntBASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3a1Q8K4Z5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 204.6 ms