Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf4Q8K4J2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf4Q8K4J2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf4Q8K4J2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Gm13436-201ENSMUST00000120418 567 ntBASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf4Q8K4J2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms