Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scara5Q8K299 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.87□□□□□ -0.03
Scara5Q8K299 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.87□□□□□ -0.03
Scara5Q8K299 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Scara5Q8K299 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.87□□□□□ -0.03
Scara5Q8K299 Gm7775-201ENSMUST00000218871 853 ntBASIC14.87□□□□□ -0.03
Scara5Q8K299 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.87□□□□□ -0.03
Scara5Q8K299 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.87□□□□□ -0.03
Scara5Q8K299 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.87□□□□□ -0.03
Scara5Q8K299 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scara5Q8K299 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gm27680-201ENSMUST00000184192 160 ntBASIC14.86□□□□□ -0.03
Scara5Q8K299 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.86□□□□□ -0.03
Scara5Q8K299 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scara5Q8K299 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scara5Q8K299 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Gm27533-201ENSMUST00000183800 152 ntBASIC14.85□□□□□ -0.03
Scara5Q8K299 Gm27920-201ENSMUST00000183953 96 ntBASIC14.85□□□□□ -0.03
Scara5Q8K299 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.85□□□□□ -0.03
Scara5Q8K299 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.85□□□□□ -0.03
Scara5Q8K299 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.85□□□□□ -0.03
Scara5Q8K299 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.85□□□□□ -0.03
Scara5Q8K299 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scara5Q8K299 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scara5Q8K299 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.85□□□□□ -0.03
Scara5Q8K299 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scara5Q8K299 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scara5Q8K299 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scara5Q8K299 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scara5Q8K299 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scara5Q8K299 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scara5Q8K299 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.84□□□□□ -0.03
Scara5Q8K299 Gm43433-201ENSMUST00000196573 481 ntBASIC14.84□□□□□ -0.03
Scara5Q8K299 Gm44344-201ENSMUST00000200287 129 ntBASIC14.84□□□□□ -0.03
Scara5Q8K299 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scara5Q8K299 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms