Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm11764-201ENSMUST00000120221 623 ntBASIC13.29□□□□□ -0.28
ShfQ8CG80 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.29□□□□□ -0.28
ShfQ8CG80 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Gm7222-201ENSMUST00000117512 906 ntBASIC13.28□□□□□ -0.28
ShfQ8CG80 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.28□□□□□ -0.28
ShfQ8CG80 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.28□□□□□ -0.28
ShfQ8CG80 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ShfQ8CG80 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShfQ8CG80 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
ShfQ8CG80 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
ShfQ8CG80 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShfQ8CG80 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.27□□□□□ -0.29
ShfQ8CG80 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Gm7787-201ENSMUST00000216858 688 ntBASIC13.27□□□□□ -0.29
ShfQ8CG80 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.27□□□□□ -0.29
ShfQ8CG80 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ShfQ8CG80 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms