Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.42■□□□□ 0.54
Smc5Q8CG46 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc5Q8CG46 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.41■□□□□ 0.54
Smc5Q8CG46 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.41■□□□□ 0.54
Smc5Q8CG46 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.41■□□□□ 0.54
Smc5Q8CG46 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.41■□□□□ 0.54
Smc5Q8CG46 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.41■□□□□ 0.54
Smc5Q8CG46 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Smc5Q8CG46 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.4■□□□□ 0.54
Smc5Q8CG46 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smc5Q8CG46 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Smc5Q8CG46 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc5Q8CG46 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc5Q8CG46 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.39■□□□□ 0.54
Smc5Q8CG46 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Gm11764-201ENSMUST00000120221 623 ntBASIC18.39■□□□□ 0.53
Smc5Q8CG46 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Ank2-226ENSMUST00000189368 339 ntBASIC18.39■□□□□ 0.53
Smc5Q8CG46 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.39■□□□□ 0.53
Smc5Q8CG46 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms