Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps53Q8CCB4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps53Q8CCB4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Gm44492-201ENSMUST00000197012 141 ntBASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps53Q8CCB4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms