Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Gm9727-201ENSMUST00000161387 555 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Gm45747-201ENSMUST00000212203 999 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Gm10154-201ENSMUST00000084445 354 ntBASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim9Q8C7M3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim9Q8C7M3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Gm16026-204ENSMUST00000162652 683 ntBASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim9Q8C7M3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm8749-201ENSMUST00000117737 331 ntBASIC16.38■□□□□ 0.21
Trim9Q8C7M3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm12134-201ENSMUST00000122109 520 ntBASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim9Q8C7M3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm13464-201ENSMUST00000119418 935 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms