Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm29424-201ENSMUST00000189716 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm28599-201ENSMUST00000189838 694 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21867-201ENSMUST00000189917 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm29269-201ENSMUST00000190087 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21722-201ENSMUST00000190153 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm28423-201ENSMUST00000190701 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21899-201ENSMUST00000190745 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21910-201ENSMUST00000191163 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21849-201ENSMUST00000191571 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm28678-201ENSMUST00000191593 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm20910-201ENSMUST00000193268 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Gm21871-201ENSMUST00000194621 696 ntBASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a6Q8C6K9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a6Q8C6K9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gm6745-201ENSMUST00000199216 526 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms