Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc60Q8C4J0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc60Q8C4J0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc60Q8C4J0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc60Q8C4J0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms