Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19.71■□□□□ 0.75
Cps1Q8C196 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Snora78-201ENSMUST00000158630 128 ntBASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cps1Q8C196 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.71■□□□□ 0.75
Cps1Q8C196 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Cps1Q8C196 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Gm6244-201ENSMUST00000178732 841 ntBASIC19.7■□□□□ 0.74
Cps1Q8C196 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cps1Q8C196 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.7■□□□□ 0.74
Cps1Q8C196 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Gm18307-201ENSMUST00000206864 949 ntBASIC19.69■□□□□ 0.74
Cps1Q8C196 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Cps1Q8C196 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cps1Q8C196 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.69■□□□□ 0.74
Cps1Q8C196 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.68■□□□□ 0.74
Cps1Q8C196 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.68■□□□□ 0.74
Cps1Q8C196 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Cps1Q8C196 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC19.68■□□□□ 0.74
Cps1Q8C196 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Cps1Q8C196 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
Cps1Q8C196 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.68■□□□□ 0.74
Cps1Q8C196 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Cps1Q8C196 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cps1Q8C196 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC19.67■□□□□ 0.74
Cps1Q8C196 Gm45331-201ENSMUST00000209868 554 ntBASIC19.67■□□□□ 0.74
Cps1Q8C196 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cps1Q8C196 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.67■□□□□ 0.74
Cps1Q8C196 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cps1Q8C196 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cps1Q8C196 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms