Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm27300-201ENSMUST00000184085 97 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm27335-201ENSMUST00000184758 97 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ppp4r4Q8C0Y0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Gm27525-201ENSMUST00000184465 107 ntBASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ppp4r4Q8C0Y0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ppp4r4Q8C0Y0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Gm18246-201ENSMUST00000221023 728 ntBASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ppp4r4Q8C0Y0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ppp4r4Q8C0Y0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ppp4r4Q8C0Y0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ppp4r4Q8C0Y0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ppp4r4Q8C0Y0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms