Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim47Q8C0E3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim47Q8C0E3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Gm43125-201ENSMUST00000201724 730 ntBASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim47Q8C0E3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.46■□□□□ 0.23
Trim47Q8C0E3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.46■□□□□ 0.23
Trim47Q8C0E3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim47Q8C0E3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim47Q8C0E3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Trim47Q8C0E3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim47Q8C0E3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Trim47Q8C0E3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim47Q8C0E3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Efs-202ENSMUST00000227037 2540 ntBASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trim47Q8C0E3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms