Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap1Q8BTW8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap1Q8BTW8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap1Q8BTW8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk5rap1Q8BTW8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk5rap1Q8BTW8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Mir449b-201ENSMUST00000104833 80 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Mir6956-201ENSMUST00000183598 62 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk5rap1Q8BTW8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm15483-201ENSMUST00000120338 456 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm25948-201ENSMUST00000175334 112 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm10576-201ENSMUST00000191927 825 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap1Q8BTW8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms