Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cpne3Q8BT60 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne3Q8BT60 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpne3Q8BT60 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpne3Q8BT60 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Gm34391-201ENSMUST00000203706 907 ntBASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpne3Q8BT60 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm6089-201ENSMUST00000197666 938 ntBASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpne3Q8BT60 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm25990-201ENSMUST00000102440 86 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm24589-201ENSMUST00000116692 94 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Gm27459-201ENSMUST00000184860 107 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Birc2-201ENSMUST00000054878 378 ntBASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms