Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sfr1Q8BP27 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sfr1Q8BP27 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gm5177-201ENSMUST00000183092 997 ntBASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Thap2-203ENSMUST00000218989 527 ntBASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sfr1Q8BP27 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Gm27301-201ENSMUST00000184012 127 ntBASIC15.13■□□□□ 0.01
Sfr1Q8BP27 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms