Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ckap4Q8BMK4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm4535-201ENSMUST00000182274 558 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm27459-201ENSMUST00000184860 107 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm10355-201ENSMUST00000097146 517 ntBASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ckap4Q8BMK4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms