Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf18Q8BM39 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf18Q8BM39 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.17□□□□□ -0.14
Prpf18Q8BM39 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms