Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.24□□□□□ -0.13
SynbQ8BI41 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.24□□□□□ -0.13
SynbQ8BI41 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Thap2-203ENSMUST00000218989 527 ntBASIC14.24□□□□□ -0.13
SynbQ8BI41 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.24□□□□□ -0.13
SynbQ8BI41 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynbQ8BI41 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.24□□□□□ -0.13
SynbQ8BI41 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SynbQ8BI41 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SynbQ8BI41 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SynbQ8BI41 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.22□□□□□ -0.13
SynbQ8BI41 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.22□□□□□ -0.13
SynbQ8BI41 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.22□□□□□ -0.13
SynbQ8BI41 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms