Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Mir5131-201ENSMUST00000175426 93 ntBASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Gm2651-201ENSMUST00000203560 838 ntBASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn3Q8BHH8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14□□□□□ -0.17
Clrn3Q8BHH8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gm11839-201ENSMUST00000120647 1953 ntBASIC14□□□□□ -0.17
Clrn3Q8BHH8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 CT009510.1-201ENSMUST00000227972 270 ntBASIC14□□□□□ -0.17
Clrn3Q8BHH8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn3Q8BHH8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn3Q8BHH8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Grk6-207ENSMUST00000225925 2769 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms