Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Mir3113-201ENSMUST00000175478 76 ntBASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm4995-201ENSMUST00000117247 432 ntBASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Depdc1bQ8BH88 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Gm9682-201ENSMUST00000197505 556 ntBASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Gm7787-201ENSMUST00000216858 688 ntBASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Gm10175-201ENSMUST00000086013 645 ntBASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Depdc1bQ8BH88 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Gm14822-201ENSMUST00000122247 291 ntBASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.16■□□□□ 0.18
Depdc1bQ8BH88 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms