Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4bQ8BGE6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Gm11779-201ENSMUST00000118541 368 ntBASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Gm16198-201ENSMUST00000118766 670 ntBASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Gm45747-201ENSMUST00000212203 999 ntBASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Thap2-203ENSMUST00000218989 527 ntBASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4bQ8BGE6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4bQ8BGE6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14□□□□□ -0.17
Atg4bQ8BGE6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14□□□□□ -0.17
Atg4bQ8BGE6 Gm10154-201ENSMUST00000084445 354 ntBASIC14□□□□□ -0.17
Atg4bQ8BGE6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atg4bQ8BGE6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms