Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.69□□□□□ -0.06
Ubp1Q811S7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.69□□□□□ -0.06
Ubp1Q811S7 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.69□□□□□ -0.06
Ubp1Q811S7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubp1Q811S7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm44492-201ENSMUST00000197012 141 ntBASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.68□□□□□ -0.06
Ubp1Q811S7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.68□□□□□ -0.06
Ubp1Q811S7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ubp1Q811S7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.67□□□□□ -0.06
Ubp1Q811S7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.67□□□□□ -0.06
Ubp1Q811S7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.67□□□□□ -0.06
Ubp1Q811S7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubp1Q811S7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ubp1Q811S7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms