Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Gm13597-201ENSMUST00000121239 375 ntBASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Gm12134-201ENSMUST00000122109 520 ntBASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Mir5126-201ENSMUST00000175513 77 ntBASIC14.58□□□□□ -0.08
Ccdc116Q80X53 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc116Q80X53 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Ccdc116Q80X53 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gm12350-201ENSMUST00000121208 462 ntBASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.56□□□□□ -0.08
Ccdc116Q80X53 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc116Q80X53 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc116Q80X53 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms