Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Trim62Q80V85 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim62Q80V85 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.38■□□□□ 0.05
Trim62Q80V85 Gm14822-201ENSMUST00000122247 291 ntBASIC15.38■□□□□ 0.05
Trim62Q80V85 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Gm27702-201ENSMUST00000184512 56 ntBASIC15.38■□□□□ 0.05
Trim62Q80V85 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim62Q80V85 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim62Q80V85 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim62Q80V85 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Gm4995-201ENSMUST00000117247 432 ntBASIC15.37■□□□□ 0.05
Trim62Q80V85 Gm13464-201ENSMUST00000119418 935 ntBASIC15.37■□□□□ 0.05
Trim62Q80V85 Gm18057-201ENSMUST00000208220 503 ntBASIC15.37■□□□□ 0.05
Trim62Q80V85 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.37■□□□□ 0.05
Trim62Q80V85 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim62Q80V85 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim62Q80V85 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.36■□□□□ 0.05
Trim62Q80V85 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.36■□□□□ 0.05
Trim62Q80V85 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm6973-201ENSMUST00000117080 721 ntBASIC15.36■□□□□ 0.05
Trim62Q80V85 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim62Q80V85 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim62Q80V85 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms