Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh19Q80TF3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh19Q80TF3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdh19Q80TF3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh19Q80TF3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh19Q80TF3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh19Q80TF3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22065-201ENSMUST00000103753 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22066-201ENSMUST00000103761 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24932-201ENSMUST00000103763 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24115-201ENSMUST00000103799 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22190-201ENSMUST00000103827 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22191-201ENSMUST00000103831 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24721-201ENSMUST00000103849 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm28018-201ENSMUST00000103869 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm26399-201ENSMUST00000103937 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25349-201ENSMUST00000177728 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm23616-201ENSMUST00000177797 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25871-201ENSMUST00000177816 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24752-201ENSMUST00000178240 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24496-201ENSMUST00000178287 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25649-201ENSMUST00000178476 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25548-201ENSMUST00000178681 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm23147-201ENSMUST00000178841 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm26095-201ENSMUST00000179270 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22171-201ENSMUST00000179283 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm23936-201ENSMUST00000179354 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm22619-201ENSMUST00000179516 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25255-201ENSMUST00000179579 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24755-201ENSMUST00000179691 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm26506-201ENSMUST00000179692 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm25086-201ENSMUST00000179931 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm23243-201ENSMUST00000180047 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24659-201ENSMUST00000180212 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm24169-201ENSMUST00000180244 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm23689-201ENSMUST00000180354 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm27359-201ENSMUST00000184153 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm27785-201ENSMUST00000184268 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm27466-201ENSMUST00000184396 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm27703-201ENSMUST00000184836 110 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh19Q80TF3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms