Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm16026-204ENSMUST00000162652 683 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Gm18737-201ENSMUST00000173594 937 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 Mir6977-201ENSMUST00000184960 64 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Prob1-201ENSMUST00000097619 3021 ntBASIC13.75□□□□□ -0.21
Pif1Q80SX8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.74□□□□□ -0.21
Pif1Q80SX8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Gm38225-201ENSMUST00000194001 393 ntBASIC13.74□□□□□ -0.21
Pif1Q80SX8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pif1Q80SX8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm2810-201ENSMUST00000118681 990 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm12428-201ENSMUST00000119844 727 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.73□□□□□ -0.21
Pif1Q80SX8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pif1Q80SX8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms