Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sned1Q70E20 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Gm38241-201ENSMUST00000192641 898 ntBASIC17.68■□□□□ 0.42
Sned1Q70E20 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Gm10012-201ENSMUST00000078252 192 ntBASIC17.68■□□□□ 0.42
Sned1Q70E20 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.68■□□□□ 0.42
Sned1Q70E20 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Gm15376-201ENSMUST00000122258 783 ntBASIC17.67■□□□□ 0.42
Sned1Q70E20 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.67■□□□□ 0.42
Sned1Q70E20 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sned1Q70E20 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.67■□□□□ 0.42
Sned1Q70E20 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sned1Q70E20 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm14723-201ENSMUST00000118686 215 ntBASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Mir8109-201ENSMUST00000184375 117 ntBASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.66■□□□□ 0.42
Sned1Q70E20 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.66■□□□□ 0.42
Sned1Q70E20 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sned1Q70E20 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sned1Q70E20 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm5370-201ENSMUST00000187187 574 ntBASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sned1Q70E20 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sned1Q70E20 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Sned1Q70E20 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Gm11524-201ENSMUST00000119349 807 ntBASIC17.64■□□□□ 0.42
Sned1Q70E20 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sned1Q70E20 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Sned1Q70E20 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sned1Q70E20 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.64■□□□□ 0.41
Sned1Q70E20 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sned1Q70E20 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sned1Q70E20 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.64■□□□□ 0.41
Sned1Q70E20 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Sned1Q70E20 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Mir3547-201ENSMUST00000175461 88 ntBASIC17.64■□□□□ 0.41
Sned1Q70E20 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.64■□□□□ 0.41
Sned1Q70E20 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sned1Q70E20 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms