Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Gm12644-201ENSMUST00000119935 606 ntBASIC16.55■□□□□ 0.24
Dhx40Q6PE54 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dhx40Q6PE54 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dhx40Q6PE54 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gm34391-201ENSMUST00000203706 907 ntBASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dhx40Q6PE54 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.52■□□□□ 0.24
Dhx40Q6PE54 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms