Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Gm11355-201ENSMUST00000121120 306 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Gm10052-201ENSMUST00000168019 960 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Gm44430-201ENSMUST00000203376 995 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Gm7729-201ENSMUST00000050143 801 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf220Q6PDX6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gm6433-201ENSMUST00000118634 875 ntBASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gm15565-201ENSMUST00000118890 427 ntBASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gm22697-201ENSMUST00000175194 63 ntBASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf220Q6PDX6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf220Q6PDX6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms