Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcc2Q6PDG5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Gm13597-201ENSMUST00000121239 375 ntBASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc2Q6PDG5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Sybu-209ENSMUST00000228639 4113 ntBASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Smarcc2Q6PDG5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.33■□□□□ 0.36
Smarcc2Q6PDG5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Gm5867-201ENSMUST00000063197 592 ntBASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms