Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gm1401-201ENSMUST00000122048 772 ntBASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac4Q6NZM9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm13464-201ENSMUST00000119418 935 ntBASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Gm10154-201ENSMUST00000084445 354 ntBASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac4Q6NZM9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm8749-201ENSMUST00000117737 331 ntBASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
Hdac4Q6NZM9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.6■□□□□ 0.25
Hdac4Q6NZM9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms