Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Gm13312-201ENSMUST00000119631 718 ntBASIC15.29■□□□□ 0.04
Krt42Q6IFX2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.29■□□□□ 0.04
Krt42Q6IFX2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt42Q6IFX2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gm22240-201ENSMUST00000175225 82 ntBASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Gm9172-201ENSMUST00000212092 954 ntBASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.27■□□□□ 0.04
Krt42Q6IFX2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Acot6-202ENSMUST00000222921 3622 ntBASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt42Q6IFX2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt42Q6IFX2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms