Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkp4Q68FH0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Gm18195-201ENSMUST00000207604 706 ntBASIC14.24□□□□□ -0.13
Pkp4Q68FH0 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp4Q68FH0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp4Q68FH0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.22□□□□□ -0.13
Pkp4Q68FH0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.22□□□□□ -0.13
Pkp4Q68FH0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms