Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.8■□□□□ 0.6
Clcn1Q64347 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.8■□□□□ 0.6
Clcn1Q64347 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.8■□□□□ 0.6
Clcn1Q64347 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.8■□□□□ 0.6
Clcn1Q64347 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Gm27533-201ENSMUST00000183800 152 ntBASIC18.8■□□□□ 0.6
Clcn1Q64347 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Syt7-205ENSMUST00000224135 1557 ntBASIC18.8■□□□□ 0.6
Clcn1Q64347 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn1Q64347 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.79■□□□□ 0.6
Clcn1Q64347 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn1Q64347 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clcn1Q64347 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn1Q64347 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn1Q64347 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn1Q64347 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.79■□□□□ 0.6
Clcn1Q64347 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.79■□□□□ 0.6
Clcn1Q64347 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn1Q64347 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.78■□□□□ 0.6
Clcn1Q64347 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.78■□□□□ 0.6
Clcn1Q64347 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Gm14719-201ENSMUST00000121891 340 ntBASIC18.78■□□□□ 0.6
Clcn1Q64347 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Gm15823-201ENSMUST00000064305 670 ntBASIC18.78■□□□□ 0.6
Clcn1Q64347 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.78■□□□□ 0.6
Clcn1Q64347 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.78■□□□□ 0.6
Clcn1Q64347 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn1Q64347 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
Clcn1Q64347 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Clcn1Q64347 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Clcn1Q64347 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Clcn1Q64347 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.77■□□□□ 0.6
Clcn1Q64347 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn1Q64347 Gm25144-201ENSMUST00000179561 110 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms