Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm8285-201ENSMUST00000208293 759 ntBASIC12.06□□□□□ -0.48
Col7a1Q63870 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Col7a1Q63870 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Col7a1Q63870 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.05□□□□□ -0.48
Col7a1Q63870 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.05□□□□□ -0.48
Col7a1Q63870 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.05□□□□□ -0.48
Col7a1Q63870 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col7a1Q63870 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.05□□□□□ -0.48
Col7a1Q63870 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col7a1Q63870 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.04□□□□□ -0.48
Col7a1Q63870 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.04□□□□□ -0.48
Col7a1Q63870 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.04□□□□□ -0.48
Col7a1Q63870 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Gm6407-201ENSMUST00000176468 549 ntBASIC12.04□□□□□ -0.48
Col7a1Q63870 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.04□□□□□ -0.48
Col7a1Q63870 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col7a1Q63870 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.04□□□□□ -0.48
Col7a1Q63870 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.03□□□□□ -0.48
Col7a1Q63870 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col7a1Q63870 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.03□□□□□ -0.48
Col7a1Q63870 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.03□□□□□ -0.48
Col7a1Q63870 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms