Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Six2Q62232 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Six2Q62232 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.84■□□□□ 0.13
Six2Q62232 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Six2Q62232 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.84■□□□□ 0.13
Six2Q62232 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.84■□□□□ 0.13
Six2Q62232 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.84■□□□□ 0.13
Six2Q62232 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Six2Q62232 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.84■□□□□ 0.13
Six2Q62232 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six2Q62232 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Six2Q62232 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six2Q62232 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.83■□□□□ 0.12
Six2Q62232 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Gm16026-204ENSMUST00000162652 683 ntBASIC15.83■□□□□ 0.12
Six2Q62232 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.83■□□□□ 0.12
Six2Q62232 Gm45747-201ENSMUST00000212203 999 ntBASIC15.83■□□□□ 0.12
Six2Q62232 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Six2Q62232 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
Six2Q62232 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Six2Q62232 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Six2Q62232 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Six2Q62232 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six2Q62232 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.83■□□□□ 0.12
Six2Q62232 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Six2Q62232 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Gm9385-201ENSMUST00000117563 472 ntBASIC15.82■□□□□ 0.12
Six2Q62232 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.82■□□□□ 0.12
Six2Q62232 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.82■□□□□ 0.12
Six2Q62232 Thap2-203ENSMUST00000218989 527 ntBASIC15.82■□□□□ 0.12
Six2Q62232 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.82■□□□□ 0.12
Six2Q62232 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Six2Q62232 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six2Q62232 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six2Q62232 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.81■□□□□ 0.12
Six2Q62232 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Gm1401-201ENSMUST00000122048 772 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six2Q62232 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.81■□□□□ 0.12
Six2Q62232 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Gm2451-201ENSMUST00000199447 999 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Gm10290-201ENSMUST00000200451 999 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.81■□□□□ 0.12
Six2Q62232 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms