Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm42693-201ENSMUST00000196779 631 ntBASIC17.26■□□□□ 0.35
Scn9aQ62205 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.25■□□□□ 0.35
Scn9aQ62205 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.25■□□□□ 0.35
Scn9aQ62205 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Gm14660-201ENSMUST00000119809 575 ntBASIC17.25■□□□□ 0.35
Scn9aQ62205 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Gm8463-201ENSMUST00000208573 613 ntBASIC17.25■□□□□ 0.35
Scn9aQ62205 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn9aQ62205 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn9aQ62205 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.24■□□□□ 0.35
Scn9aQ62205 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm15198-201ENSMUST00000117283 177 ntBASIC17.24■□□□□ 0.35
Scn9aQ62205 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm45841-201ENSMUST00000207700 164 ntBASIC17.24■□□□□ 0.35
Scn9aQ62205 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.24■□□□□ 0.35
Scn9aQ62205 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn9aQ62205 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn9aQ62205 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Gm15393-201ENSMUST00000120499 219 ntBASIC17.23■□□□□ 0.35
Scn9aQ62205 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn9aQ62205 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn9aQ62205 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.22■□□□□ 0.35
Scn9aQ62205 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.22■□□□□ 0.35
Scn9aQ62205 Gm27839-201ENSMUST00000184242 106 ntBASIC17.22■□□□□ 0.35
Scn9aQ62205 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scn9aQ62205 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms