Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.76□□□□□ -0.21
VcanQ62059 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Gm14263-201ENSMUST00000117955 746 ntBASIC13.76□□□□□ -0.21
VcanQ62059 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Gm8969-201ENSMUST00000199694 526 ntBASIC13.76□□□□□ -0.21
VcanQ62059 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VcanQ62059 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.76□□□□□ -0.21
VcanQ62059 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.76□□□□□ -0.21
VcanQ62059 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VcanQ62059 Mir877-201ENSMUST00000104738 85 ntBASIC13.75□□□□□ -0.21
VcanQ62059 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.75□□□□□ -0.21
VcanQ62059 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VcanQ62059 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VcanQ62059 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.75□□□□□ -0.21
VcanQ62059 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.75□□□□□ -0.21
VcanQ62059 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.75□□□□□ -0.21
VcanQ62059 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.75□□□□□ -0.21
VcanQ62059 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.75□□□□□ -0.21
VcanQ62059 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VcanQ62059 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
VcanQ62059 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VcanQ62059 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Gm12384-201ENSMUST00000119228 919 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm13461-201ENSMUST00000120980 662 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.74□□□□□ -0.21
VcanQ62059 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
VcanQ62059 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VcanQ62059 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm27847-201ENSMUST00000183711 107 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm27375-201ENSMUST00000183799 107 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm27631-201ENSMUST00000184163 466 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Gm12134-201ENSMUST00000122109 520 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.74□□□□□ -0.21
VcanQ62059 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm29310-201ENSMUST00000185468 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21825-201ENSMUST00000185728 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm29109-201ENSMUST00000185895 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21896-201ENSMUST00000186520 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21873-201ENSMUST00000186728 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21794-201ENSMUST00000187056 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm5370-201ENSMUST00000187187 574 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21880-201ENSMUST00000187275 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21826-201ENSMUST00000187451 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21198-201ENSMUST00000188393 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21749-201ENSMUST00000189343 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21901-201ENSMUST00000189568 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm29424-201ENSMUST00000189716 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm28599-201ENSMUST00000189838 694 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21867-201ENSMUST00000189917 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm29269-201ENSMUST00000190087 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21722-201ENSMUST00000190153 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm28423-201ENSMUST00000190701 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21899-201ENSMUST00000190745 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21910-201ENSMUST00000191163 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21849-201ENSMUST00000191571 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm28678-201ENSMUST00000191593 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm20910-201ENSMUST00000193268 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm21871-201ENSMUST00000194621 696 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm8463-201ENSMUST00000208573 613 ntBASIC13.74□□□□□ -0.21
VcanQ62059 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms