Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox17Q61473 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox17Q61473 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.99□□□□□ -0.17
Sox17Q61473 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox17Q61473 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Gm5587-201ENSMUST00000206270 674 ntBASIC13.99□□□□□ -0.17
Sox17Q61473 Gm9172-201ENSMUST00000212092 954 ntBASIC13.99□□□□□ -0.17
Sox17Q61473 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.99□□□□□ -0.17
Sox17Q61473 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox17Q61473 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sox17Q61473 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox17Q61473 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox17Q61473 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox17Q61473 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.98□□□□□ -0.17
Sox17Q61473 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.98□□□□□ -0.17
Sox17Q61473 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox17Q61473 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox17Q61473 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox17Q61473 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox17Q61473 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox17Q61473 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Gm8318-201ENSMUST00000182954 872 ntBASIC13.97□□□□□ -0.17
Sox17Q61473 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox17Q61473 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.97□□□□□ -0.17
Sox17Q61473 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox17Q61473 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox17Q61473 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox17Q61473 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox17Q61473 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms