Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six4Q61321 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15□□□□□ -0.01
Six4Q61321 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15□□□□□ -0.01
Six4Q61321 Gm15483-201ENSMUST00000120338 456 ntBASIC15□□□□□ -0.01
Six4Q61321 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15□□□□□ -0.01
Six4Q61321 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15□□□□□ -0.01
Six4Q61321 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Six4Q61321 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Six4Q61321 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
Six4Q61321 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Six4Q61321 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Six4Q61321 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.99□□□□□ -0.01
Six4Q61321 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gm13464-201ENSMUST00000119418 935 ntBASIC14.99□□□□□ -0.01
Six4Q61321 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.99□□□□□ -0.01
Six4Q61321 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.99□□□□□ -0.01
Six4Q61321 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Six4Q61321 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.99□□□□□ -0.01
Six4Q61321 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.99□□□□□ -0.01
Six4Q61321 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Six4Q61321 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.99□□□□□ -0.01
Six4Q61321 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.99□□□□□ -0.01
Six4Q61321 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Six4Q61321 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six4Q61321 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Six4Q61321 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Six4Q61321 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Six4Q61321 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms