Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm15565-201ENSMUST00000118890 427 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm8825-201ENSMUST00000182565 998 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm4518-201ENSMUST00000182638 718 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm43371-201ENSMUST00000202838 1031 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Mre11Q61216 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.83■□□□□ 0.44
Mre11Q61216 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Mre11Q61216 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Mre11Q61216 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mre11Q61216 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Mre11Q61216 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.82■□□□□ 0.44
Mre11Q61216 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mre11Q61216 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Mre11Q61216 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Mre11Q61216 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Gm19164-201ENSMUST00000210667 640 ntBASIC17.82■□□□□ 0.44
Mre11Q61216 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Mre11Q61216 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Mre11Q61216 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mre11Q61216 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mre11Q61216 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.81■□□□□ 0.44
Mre11Q61216 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mre11Q61216 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.81■□□□□ 0.44
Mre11Q61216 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.81■□□□□ 0.44
Mre11Q61216 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.81■□□□□ 0.44
Mre11Q61216 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Mre11Q61216 Gm25007-201ENSMUST00000083808 133 ntBASIC17.81■□□□□ 0.44
Mre11Q61216 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Mre11Q61216 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.81■□□□□ 0.44
Mre11Q61216 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.81■□□□□ 0.44
Mre11Q61216 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mre11Q61216 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.81■□□□□ 0.44
Mre11Q61216 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Mre11Q61216 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.8■□□□□ 0.44
Mre11Q61216 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.8■□□□□ 0.44
Mre11Q61216 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Mre11Q61216 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Mre11Q61216 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.8■□□□□ 0.44
Mre11Q61216 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms