Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.76□□□□□ -0.37
Clns1aQ61189 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Carlr-201ENSMUST00000181515 2574 ntBASIC12.76□□□□□ -0.37
Clns1aQ61189 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Gm12008-201ENSMUST00000117791 755 ntBASIC12.75□□□□□ -0.37
Clns1aQ61189 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Clns1aQ61189 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.75□□□□□ -0.37
Clns1aQ61189 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.75□□□□□ -0.37
Clns1aQ61189 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.75□□□□□ -0.37
Clns1aQ61189 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.75□□□□□ -0.37
Clns1aQ61189 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clns1aQ61189 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clns1aQ61189 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clns1aQ61189 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Grk6-207ENSMUST00000225925 2769 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Mir770-201ENSMUST00000103252 94 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm19164-201ENSMUST00000210667 640 ntBASIC12.73□□□□□ -0.37
Clns1aQ61189 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clns1aQ61189 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clns1aQ61189 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms