Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Mir5126-201ENSMUST00000175513 77 ntBASIC13.67□□□□□ -0.22
Foxd3Q61060 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.67□□□□□ -0.22
Foxd3Q61060 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Foxd3Q61060 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxd3Q61060 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.66□□□□□ -0.22
Foxd3Q61060 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm13418-201ENSMUST00000119097 944 ntBASIC13.66□□□□□ -0.22
Foxd3Q61060 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.66□□□□□ -0.22
Foxd3Q61060 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Foxd3Q61060 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxd3Q61060 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Foxd3Q61060 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.65□□□□□ -0.22
Foxd3Q61060 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Gm42790-201ENSMUST00000201268 969 ntBASIC13.65□□□□□ -0.22
Foxd3Q61060 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.65□□□□□ -0.22
Foxd3Q61060 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Gm15590-201ENSMUST00000078419 552 ntBASIC13.65□□□□□ -0.22
Foxd3Q61060 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Foxd3Q61060 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Foxd3Q61060 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxd3Q61060 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms