Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.19□□□□□ -0.14
Nr1h4Q60641 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.19□□□□□ -0.14
Nr1h4Q60641 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Nr1h4Q60641 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.17□□□□□ -0.14
Nr1h4Q60641 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nr1h4Q60641 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1h4Q60641 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Gm8097-201ENSMUST00000117903 829 ntBASIC14.16□□□□□ -0.14
Nr1h4Q60641 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Gm27704-201ENSMUST00000185094 107 ntBASIC14.16□□□□□ -0.14
Nr1h4Q60641 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.16□□□□□ -0.14
Nr1h4Q60641 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.16□□□□□ -0.14
Nr1h4Q60641 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Nr1h4Q60641 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms