Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm6973-201ENSMUST00000117080 721 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm16026-204ENSMUST00000162652 683 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm22175-201ENSMUST00000175007 78 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm7774-201ENSMUST00000200064 533 ntBASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom1Q5SX79 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom1Q5SX79 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Gm24158-201ENSMUST00000175263 71 ntBASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Gm27430-201ENSMUST00000184585 107 ntBASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Gm44333-201ENSMUST00000197168 107 ntBASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom1Q5SX79 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.82■□□□□ 0.12
Shroom1Q5SX79 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom1Q5SX79 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms