Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gm25925-201ENSMUST00000158314 306 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gm18737-201ENSMUST00000173594 937 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gm18889-201ENSMUST00000174284 929 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gm18057-201ENSMUST00000208220 503 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm11543-201ENSMUST00000120758 370 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm16026-204ENSMUST00000162652 683 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm44335-201ENSMUST00000196879 141 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm44297-201ENSMUST00000198304 141 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm44346-201ENSMUST00000198851 141 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm43767-201ENSMUST00000198933 381 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm5312-201ENSMUST00000203728 547 ntBASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav2Q5R1I9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gm15920-201ENSMUST00000118998 402 ntBASIC11.87□□□□□ -0.51
Trav2Q5R1I9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Mir6990-201ENSMUST00000183724 91 ntBASIC11.87□□□□□ -0.51
Trav2Q5R1I9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gm20553-201ENSMUST00000204205 844 ntBASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms