Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-1Q5R1I8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Gm13238-201ENSMUST00000117655 780 ntBASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-1Q5R1I8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-1Q5R1I8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms