Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Gm5479-201ENSMUST00000160578 435 ntBASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Dancr-204ENSMUST00000132389 2347 ntBASIC13.04□□□□□ -0.32
Trav6-2Q5R1I4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-2Q5R1I4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-2Q5R1I4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-2Q5R1I4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-2Q5R1I4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-2Q5R1I4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms