Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim58Q5NCC9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim58Q5NCC9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim58Q5NCC9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Gm8749-201ENSMUST00000117737 331 ntBASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim58Q5NCC9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim58Q5NCC9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms